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A COLLABORATORY FOR CANCER RESEARCH

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  1. FFPE Molecular Project Shipment and Tracking Workflow

    30 Jun 2015

    This version contains changes based on the May 12 meeting discussion. 

  2. My New Publication

    07 Aug 2014 | Contributor(s): Patrick Mulligan

    This is my new publication, and I am trying to see if it has been publicized.

  3. CT segmentation challenge "dry run"

    17 Sep 2013 | Contributor(s): Jayashree Kalpathy-Cramer

    This report describes the PET/CT WG activities in performing a "dry run" of a CT segmentation challenge

  4. caNanoLab: data sharing to expedite the use of nanotechnology in biomedicine

    13 Dec 2013 | Publications | Contributor(s): Sharon Gaheen, George W Hinkal, Stephanie A Morris, Michal Lijowski, Mervi Heiskanen, Juli Klemm

    The use of nanotechnology in biomedicine involves the engineering of nanomaterials to act as therapeutic carriers, targeting agents and diagnostic imaging devices. The application of nanotechnology in cancer aims to transform early detection, targeted therapeutics and cancer prevention and...

  5. Test

    27 Jan 2014 | Publications

  6. Genome-wide transcriptional sequencing identifies novel mutations in metabolic genes in human hepatocellular carcinoma (HCC)

    02 Feb 2014 | Publications

    Hepatocellular carcinoma (HCC) is the fifth most common cancer and the third most common cause of cancer mortality in the world. Although the association of HCC with chronic liver disease is well established, the exact etiology of HCC remains undefined. Here, we report the results of...

  7. 2014 QIN Abstract Book

    18 Apr 2014 | Publications | Contributor(s): Larry Clark

    The QIN Face-to-Face Meeting Presentations Posters and Abstracts.

  8. OmicCircos: A Simple-to-Use R Package for the Circular Visualization of Multidimensional Omics Data

    28 Apr 2014 | Publications | Contributor(s): Hu Y, Chunhua Yan, Hsu CH, Chen QR, Niu K, Komatsoulis GA, Meerzaman D.

    OmicCircos is an R software package used to generate high-quality circular plots for visualizing genomic variations, including mutation patterns, copy number variations (CNVs), expression patterns, and methylation patterns. Such variations can be displayed as scatterplot, line, or text-label...

  9. Three transplantable mouse mammary tumor models of human breast cancer were used to assess the effects of fixation on morphology and the preservation of 4 breast antigens (ER, PR, Ki67, Her2).

    04 Jun 2014 | Publications | Contributor(s): Neil Hubbard

    Quantitative Image Analysis (QIA) of digitized whole slide images for morphometric parameters and immunohistochemistry of breast cancer antigens was used to evaluate the technical reproducibility, biological variability, and intratumoral heterogeneity in three transplantable mouse mammary tumor...

  10. Economic Costs of Cancer Health Disparities Report

    26 Jul 2014 | Publications | Contributor(s): CRCHD

    Identify methodological and philosophical issues involved in filling the gap in our understanding of the economic costs of cancer health disparities from these proceedings and recommendations