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  1. FAIR for NanoSafety: where do we stand?

    05 Apr 2019 | Contributor(s): Egon Willighagen

    Nano WG April 4, 2019 Findable, Accessible, Interoperable, Reusable (FAIR) sharing of nanosafety data.

  2. European Open Science Cloud: Concept and opportunities

    26 Mar 2019 | Contributor(s): Gergely Sipos

    EOSC-hub is a 33 million Euro H2020 project that started in January 2018 with the involvement of over 100 institutes. In three years the project establishes the first elements of the European Open Science Cloud (EOSC) – the infrastructure aimed to accelerate and support the current...

  3. A multi-modal data resource for investigating geographic heterogeneity in patient-derived xenograft tumors

    13 Mar 2019 | Contributor(s): Satwik Rajaram, Maike Roth, Julia Malato, Scott Vandenberg, Byron Hann, Chloe E. Atreya, Steven J. Altschuler, Lani F. Wu

    PSON0010 Cancer Sampling Index – CaSIXStudy Contact: Lani Wu lani.wu@ucsf.eduDownload the dataset at ftp://caftpd.nci.nih.gov/psondcc/casix/Studies using Patient Derived Xenograft (PDX) models of human cancer permit a wider range of experimental approaches to measure...

  4. Development of Targeted Nanomedicines via Machine Learning Processes

    05 Mar 2019 | Contributor(s): Daniel Heller

    Nano WG February 21, 2019Description: We are using data science to facilitate the development of nanoparticle drugs incorporating kinase inhibitors with diverse chemical structures. Doing this work inspired us to bring together the nanoinformatics community...

  5. Development of natural language processing tools for nanoparticle design

    05 Mar 2019 | Contributor(s): Nastassja Lewinski

    Nano WG February 28, 2019: In this presentation, an introduction to the application of natural language processing techniques to nanotechnology data will be discussed.  Natural language processing tools can aid in the automatic categorization, extraction, and analysis of data from...

  6. Innovative Nanoinformatics models and tools: towards a Solid, verified and Integrated Approach to Predictive (eco)Toxicology (NanoSolveIT)

    04 Feb 2019 | Contributor(s): Antreas Afantitis

    Nano WG January 17, 2019NanoSolveIT (a new H2020 nanoinformatics project) aspires to introduce a ground-breaking in silico Integrated Approach to Testing and Assessment (IATA) for the environmental health and safety of Nanomaterials (NM), implemented through a decision support system packaged...

  7. nano-Ag: PBTK Models, Vblood & NIOSH

    04 Feb 2019 | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen

    Nano WG: January 31, 2019Nanoinformatics and computational models1.Examine a nano-Ag0 computational model used in a regulatory context2.SCCS has a nano-silver opinion3.NIOSH time period overlaps with the nanoinformatics roadmap4.NIOSH a case study for roadmap’s...

  8. NanoWG: Introduction to Luisa Russell, Nano WG Co-Chair

    14 Dec 2018 | Presentations | Contributor(s): Luisa Russell

    Nano WG December 13, 2018 Luisa Russell, Ph.D. Nanodelivery Systems and Devices Branch Cancer Imaging Program National Cancer Institute/National Institutes of Health

  9. Improving emerging technologies content on Wikipedia, or, what to do when someone is wrong on the Internet

    07 Dec 2018 | Presentations | Contributor(s): John P. Sadowski

    Nano WG December 6, 2018As one of the first places many people look up information on health and safety, including with emerging technologies like nanotechnology, it is important for Wikipedia to contain information that is complete, up to date, and free of errors.  Since 2012, NIOSH has...

  10. Dataset Curation, Assessment of their Quality, and Prediction Model Developments for Safe and Sustainable Nanotechnology (S2NANO)

    29 Nov 2018 | Presentations | Contributor(s): Tae Hyun Yoon

    Nano WG November 29, 2018: Tae Hyun Yoon, Prof./CEO/Ph.D., Yoon Idea Lab. Co. Ltd. & Hanyang University In this presentation, I will introduce our recent research outcomes from S2NANO: PredictNANO project, which aimed to bridge the nanosafety knowledge gaps between R&D...

  11. NCI Alliance for Nanotechnology in Cancer, and caNanoLab: A Data Repository for Cancer Nanomedicines

    27 Nov 2018 | Presentations | Contributor(s): Luisa Russell, Mervi Heiskanen

    Nano WG presentation November15, 2018 NCI Alliance for Nanotechnology in Cancer –Structure–Achievements–Scientific FocuscaNanoLab–Intro to Platform–Data Curation–User Statistics–Future Directions

  12. NCIP Hub: Collaboration Tool for NCI Affiliated Programs and Investigators

    16 Nov 2018 | Presentations | Contributor(s): Mervi Heiskanen, Aparna Vinodh

    NCIP Hub overview and CRCHD PACHE Hub demonstration.

  13. Some thoughts on our progress in defining and advancing nanoinformatics

    06 Nov 2018 | Presentations | Contributor(s): Mark D Hoover

    Nano WG presentation November 1, 2018 by Mark Hoover, NIOSH Discussion on Nano WG accomplishments, goals and future directions.

  14. MetaMorpheus

    05 Oct 2018 | Tools | Contributor(s): Anthony J Cesnik, Michael Shortreed

    Bottom-up proteomics database search software with integrated posttranslational modification (PTM) discovery capability.

  15. Proteoform Suite

    05 Oct 2018 | Tools | Contributor(s): Anthony J Cesnik, Michael Shortreed

    Construction, quantification, and visualization of proteoform families

  16. caNanoLab Data Submission for Publication abc

    05 Oct 2018 | Publications | Contributor(s): Mervi Heiskanen

  17. Navigating the VA's IRB Process

    04 Oct 2018 | Teaching Materials | Contributor(s): Sarah Elder

    BD-STEP Senior Research Associate, Nathanael Fillmore's presentation presentation about navigating the VA's IRB Process

  18. BD-STEP Overview and Links

    04 Oct 2018 | Teaching Materials | Contributor(s): Sarah Elder

    Welcome to BD-STEPFY19 Cohort – October 2018 Big Data Scientist Training Enhancement Program (BD-STEP) has both fellows (those paid by the VHA Office of Academic Affiliations) and trainees (those in Without Compensation (WOC) appointments at a site).When you begin...

  19. NanoInformatics Knowledge Commons Curation Team: Building the Data Dictionary to Enrich Data Curation

    11 Jul 2018 | Presentations | Contributor(s): Jaleesia Amos, Yuan Tian, Mervi Heiskanen

    Nano WG Presentation, May 31st, 2018 Organized storing of data using informed-decision making to determine what information should be curated, when data curation is complete, and how to identify high-quality data. Purpose of NIKC structure & curation process: tell the story of...

  20. Overview of the NCI Cancer Research Data Commons, Genomic Data Commons (GDC), and NCI Cloud Resources

    07 Jun 2018 | Presentations | Contributor(s): Tanja Davidsen, Mervi Heiskanen

    Nano WG presentation, June 7, 2018 by Tanja Davidsen, NCI CBIIT The Cancer Research Data Commons (CRDC) and NCI Cloud Resources overview.