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Annual Meeting 2014

 

Informatics Technology for Cancer Research (ITCR) Initiative Annual PI Meeting 2014

 

The Informatics Technology for Cancer Research (ITCR) Initiative held its Annual PI Meeting on June 12-13, 2014 in Rockville, MD. The agenda and presentations are referenced below. All presentations are also available here.

June 12, 2014 (Day One)

9:00                

Shuttle bus leaves hotel

9:10-9:25

Check in and registration

9:30-9:40

Opening Remarks – Jerry Li, NCI

9:40-10:05

Keynote Presentation I - Warren Kibbe, Director, Center for Biomedical Informatics and Information Technology (CBIIT), NCI

Clinical Genomics, the Cancer Genomic Data Commons, and the NCI Cloud Pilot

Session I

ITCR Project Progress Report

Session Chair: Rao Divi, NCI

10:05-10:30

UCSC Project - David Haussler/Jing Zhu      

The UCSC Xena System

10:30-10:55

Johns Hopkins University Project - Rachel Karchin

CRAVAT and MuPIT: Updates and Plans for the Upcoming Year

10:55-11:10

Break

11:10-11:35

Broad Institute Project - Aviv Regev

Towards Reconstructing and Annotating the Cancer Transcriptome with Trinity

11:35-12:00

Dana-Farber Cancer Institute Project - Shirley Liu

Cistrome: A Transcriptional and Epigenetic Regulation Encyclopedia in Cancer

12:00-1:00

Lunch

1:00-1:25

Keynote Presentation II - James Cimino, Chief, Laboratory for Informatics Development, NIH Clinical Center

The NIH Clinical Research Data Repository: Sources, Structure, and Access

Session II

ITCR Project Progress Report (Continued)

Session Chair: Larry Clarke, NCI

1:25-1:50

University of Pittsburgh Project - Rebecca Crowley

TIES Cancer Research Network

1:50-2:15

Brigham & Women’s Hospital Project - Ron Kikinis/Andriy Fedorov

Quantitative Image Informatics for Cancer Research (QIICR)

2:15-2:40

University of Texas HSC/MD Anderson Cancer Center Project – Elmer Bernstam/Funda Merick-Bernstam

Informatics to Enable Routine Personalized Cancer Therapy

2:40-2:55

Break

Session III

Introduction of New ITCR Projects

Session Chair: Christos Patriotis, NCI

2:55-3:15

University of Pittsburgh/Boston Children’s Hospital Project – Guergana Savova

Cancer Deep Phenotyping

3:15-3:35

UCSD Project - Trey Ideker

NDEx- The Network Data Exchange: Crowdsourcing the Hallmark Networks of Cancer

3:35-3:55

PNNL Project - Bobbie-Jo Webb-Robertson

Interactive Informatics Resource for Research-driven Cancer Proteomics

3:55-4:15

University of Southern California Project – Ben Berman

Tools to Infer Tumor-Specific Transcriptional Networks by Combining Reference Epigenome Atlases with Patient DNA Methylation Profiles

4:15-4:35

Mass General Hospital Project – Hiro Yoshida

Cloud- Supercomputer-Aided Diagnostic Imaging Decision Support System

4:35-4:45

Break

4:45-6:00

Demonstrations and Project Collaboration Meetings

6:05

Shuttle bus to hotel

7:00-9:00

Group Dinner

That’s Amore Restaurant, 15201 Shady Grove Rd, Rockville, MD

June 13, 2014 (Day Two)

8:30

Shuttle bus leaves hotel

8:40-8:55

Check in

9:00-9:20

Update of the NCIP Hub

Ishwar Chandramouliswaran, CBIIT, NCI     

9:20-9:40

Dana Farber Cancer Institute Project - John Quackenbush

MeV: Software for Next Generation Genomic Data Analysis

9:40-10:40

Group Discussion

Co-Chairs:  Rebecca Crowley and Aviv Regev

10:40-10:55

Break

10:55-11:15

Keynote Presentation III: Louis Staudt, Director, Center for Cancer Genomics, NCI

NCI Support for Cancer Genome Informatics

11:15-11:55

Introduction of Inter-Project Collaborations

Joint Xena-Trinity-Cistrome-Cravat/MuPIT collaboration

UTH/MD Anderson - U Pittsburgh-Boston Children’s Hospital collaboration

Johns Hopkins - UTH/MD Anderson collaboration

Brigham & Women’s Hospital - UTH/MD Anderson collaboration

11:55-12:00

Closing Remarks

12:00

Meeting Adjourned

Created by Lisa Mahoney Last Modified Thu June 26, 2014 9:35 pm by Lisa Mahoney